Friday, March 16, 2012

BioJava 3.0.3 released

BioJava 3.0.3 has been released and is available from
http://www.biojava.org/wiki/BioJava:Download as well as from the
BioJava maven repository at http://www.biojava.org/download/maven/ .



New Features

BioJava 3.0.3 adds several new features

- Significant improvements for the web service module (ncbi blast and
hmmer web services)

- Fastq parser (ported from the biojava 1 series to version 3)

- Support for SIFTS-PDB to UniProt mapping

- Improved support for working with external protein domain definitions

- Protmod module renamed to modfinder

- Numerous improvements all over the place (several hundred commits
since last release)

- We are also working on an update for the legacy biojava 1.8 series.

This release would not have been possible with contributions from
numerous people, thanks to all for their support!

Happy BioJava-ing!